Trace number 1592850

Some explanations

A solver is run under the control of another program named runsolver. runsolver is in charge of imposing the CPU time limit and the memory limit to the solver. It also monitors some information about the process. The trace of the execution of a solver is divided into four (or five) parts:
  1. SOLVER DATA
    This is the output of the solver (stdout and stderr).
    Note that some very long lines in this section may be truncated by your web browser ! In such a case, you may want to use the "Download as text" link to get the trace as a text file.

    When the --timestamp option is passed to the runsolver program, each line output by the solver is prepended with a timestamp which indicates at what time the line was output by the solver. Times are relative to the start of the program, given in seconds. The first timestamp (if present) is estimated CPU time. The last timestamp is wall clock time.

    As some 'v lines' may be very long (sometimes several megabytes), the 'v line' output by your solver may be split on several lines to help limit the size of the trace recorded in the database. In any case, the exact output of your solver is preserved in a trace file.
  2. VERIFIER DATA
    The output of the solver is piped to a verifier program which will search a value line "v " and, if found, will check that the given interpretation satisfies all constraints.
  3. CONVERSION SCRIPT DATA (Optionnal)
    When a conversion script is used, this section shows the messages that were output by the conversion script.
  4. WATCHER DATA
    This is the informations gathered by the runsolver program. It first prints the different limits. There's a first limit on CPU time set to X seconds (see the parameters in the trace). After this time has ellapsed, runsolver sends a SIGTERM and 2 seconds later a SIGKILL to the solver. For safety, there's also another limit set to X+30 seconds which will send a SIGXPU to the solver. The last limit is on the virtual memory used by the process (see the parameters in the trace).
    Every ten seconds, the runsolver process fetches the content of /proc/loadavg, /proc/pid/stat and /proc/pid/statm (see man proc) and prints it as raw data. This is only recorded in case we need to investigate the behaviour of a solver. The memory used by the solver (vsize) is also given every ten seconds.
    When the solver exits, runsolver prints some informations such as status and time. CPU usage is the ratio CPU Time/Real Time.
  5. LAUNCHER DATA
    These informations are related to the script which will launch the solver. The most important informations are the command line given to the solver, the md5sum of the different files and the dump of the /proc/cpuinfo and /proc/meminfo which provides some useful information on the computer.

Solver answer on this benchmark

Solver NameAnswerCPU timeWall clock time
minisat2-simp 070721SAT 35.3866 35.3987

General information on the benchmark

NameAPPLICATIONS/satComp09_BioInstances/
ndhf_xits_22_SAT.cnf
MD5SUM0370c302d744cf5297e07b7d8a6a8190
Bench CategoryAPPLICATION (applications instances)
Best result obtained on this benchmarkSAT
Best CPU time to get the best result obtained on this benchmark5.02124
Satisfiable
(Un)Satisfiability was proved
Number of variables4692
Number of clauses582514
Sum of the clauses size1741093
Maximum clause length23
Minimum clause length2
Number of clauses of size 10
Number of clauses of size 27069
Number of clauses of size 3575414
Number of clauses of size 40
Number of clauses of size 50
Number of clauses of size over 531

Solver Data 

0.00/0.00	This is MiniSat 2.0 beta
0.00/0.00	WARNING: for repeatability, setting FPU to use double precision
0.00/0.00	============================[ Problem Statistics ]=============================
0.00/0.00	|                                                                             |
0.00/0.00	|  Number of variables:  4692                                                 |
0.00/0.00	|  Number of clauses:    582514                                               |
0.39/0.46	|  Parsing time:         0.42         s                                       |
31.28/31.31	============================[ Search Statistics ]==============================
31.28/31.31	| Conflicts |          ORIGINAL         |          LEARNT          | Progress |
31.28/31.31	|           |    Vars  Clauses Literals |    Limit  Clauses Lit/Cl |          |
31.28/31.31	===============================================================================
31.28/31.31	|         0 |    3288   572603  2498477 |   190867        0    nan |  0.000 % |
31.38/31.48	|       100 |    3288   572603  2498477 |   209954      100    113 |  0.000 % |
31.48/31.55	|       250 |    3288   572603  2498477 |   230949      250    128 |  0.000 % |
31.58/31.68	|       481 |    3288   572603  2498477 |   254044      481    127 |  0.000 % |
31.79/31.86	|       818 |    3288   572603  2498477 |   279449      818    134 |  0.000 % |
32.08/32.12	|      1324 |    3288   572603  2498477 |   307394     1324    153 |  0.000 % |
32.38/32.48	|      2083 |    3288   572603  2498477 |   338133     2083    160 |  0.000 % |
32.98/33.02	|      3223 |    3288   572603  2498477 |   371947     3223    162 |  0.000 % |
33.88/33.98	|      4932 |    3288   572603  2498477 |   409141     4932    179 |  0.000 % |
35.09/35.19	|      7494 |    3288   572603  2498477 |   450055     7494    183 |  0.000 % |
35.28/35.38	===============================================================================
35.28/35.38	restarts              : 10
35.28/35.38	conflicts             : 7838           (222 /sec)
35.28/35.38	decisions             : 13834          (1.17 % random) (392 /sec)
35.28/35.38	propagations          : 463507         (13125 /sec)
35.28/35.38	conflict literals     : 1429516        (3.18 % deleted)
35.28/35.38	Memory used           : 45.23 MB
35.28/35.38	CPU time              : 35.3136 s
35.28/35.38	
35.28/35.38	s SATISFIABLE
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Verifier Data 

OK

Watcher Data 

runsolver version 3.2.9 (svn:492) (c) roussel@cril.univ-artois.fr

command line: BIN/runsolver --timestamp -w /tmp/evaluation-result-1592850-1239228305/watcher-1592850-1239228305 -o /tmp/evaluation-result-1592850-1239228305/solver-1592850-1239228305 -C 1200 -W 1800 -M 1800 --output-limit 1,15 minisat_static HOME/instance-1592850-1239228305.cnf 

Enforcing CPUTime limit (soft limit, will send SIGTERM then SIGKILL): 1200 seconds
Enforcing CPUTime limit (hard limit, will send SIGXCPU): 1230 seconds
Enforcing wall clock limit (soft limit, will send SIGTERM then SIGKILL): 1800 seconds
Enforcing VSIZE limit (soft limit, will send SIGTERM then SIGKILL): 1843200 KiB
Enforcing VSIZE limit (hard limit, stack expansion will fail with SIGSEGV, brk() and mmap() will return ENOMEM): 1894400 KiB
Solver output will be limited to a maximum of 15728640 bytes. The first 1048576 bytes and the last 14680064 bytes will be preserved
Current StackSize limit: 10240 KiB


[startup+0 s]
/proc/loadavg: 0.08 0.02 0.01 3/70 15403
/proc/meminfo: memFree=1615464/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=2216 CPUtime=0
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 434 0 0 0 0 0 0 0 18 0 1 0 1195493802 2269184 419 1992294400 134512640 135243866 4294956256 18446744073709551615 134538716 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 554 419 65 178 0 374 0

[startup+0.0801929 s]
/proc/loadavg: 0.08 0.02 0.01 3/70 15403
/proc/meminfo: memFree=1615464/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=7328 CPUtime=0.07
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 1698 0 0 0 6 1 0 0 18 0 1 0 1195493802 7503872 1683 1992294400 134512640 135243866 4294956256 18446744073709551615 134547865 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 1832 1685 65 178 0 1652 0
Current children cumulated CPU time (s) 0.07
Current children cumulated vsize (KiB) 7328

[startup+0.101195 s]
/proc/loadavg: 0.08 0.02 0.01 3/70 15403
/proc/meminfo: memFree=1615464/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=9008 CPUtime=0.09
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 2056 0 0 0 8 1 0 0 18 0 1 0 1195493802 9224192 2041 1992294400 134512640 135243866 4294956256 18446744073709551615 134748230 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 2252 2041 65 178 0 2072 0
Current children cumulated CPU time (s) 0.09
Current children cumulated vsize (KiB) 9008

[startup+0.301214 s]
/proc/loadavg: 0.08 0.02 0.01 3/70 15403
/proc/meminfo: memFree=1615464/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=23460 CPUtime=0.29
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 5535 0 0 0 26 3 0 0 19 0 1 0 1195493802 24023040 5520 1992294400 134512640 135243866 4294956256 18446744073709551615 134748230 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 5865 5520 65 178 0 5685 0
Current children cumulated CPU time (s) 0.29
Current children cumulated vsize (KiB) 23460

[startup+0.701253 s]
/proc/loadavg: 0.08 0.02 0.01 3/70 15403
/proc/meminfo: memFree=1615464/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=35872 CPUtime=0.69
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 8610 0 0 0 65 4 0 0 22 0 1 0 1195493802 36732928 8595 1992294400 134512640 135243866 4294956256 18446744073709551615 134535587 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 8968 8595 80 178 0 8788 0
Current children cumulated CPU time (s) 0.69
Current children cumulated vsize (KiB) 35872

[startup+1.50133 s]
/proc/loadavg: 0.08 0.02 0.01 2/71 15404
/proc/meminfo: memFree=1581280/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=35872 CPUtime=1.49
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 8610 0 0 0 145 4 0 0 25 0 1 0 1195493802 36732928 8595 1992294400 134512640 135243866 4294956256 18446744073709551615 134535587 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 8968 8595 80 178 0 8788 0
Current children cumulated CPU time (s) 1.49
Current children cumulated vsize (KiB) 35872

[startup+3.10149 s]
/proc/loadavg: 0.08 0.02 0.01 2/71 15404
/proc/meminfo: memFree=1581152/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=35872 CPUtime=3.09
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 8610 0 0 0 305 4 0 0 25 0 1 0 1195493802 36732928 8595 1992294400 134512640 135243866 4294956256 18446744073709551615 134550591 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 8968 8595 80 178 0 8788 0
Current children cumulated CPU time (s) 3.09
Current children cumulated vsize (KiB) 35872

[startup+6.3018 s]
/proc/loadavg: 0.15 0.03 0.01 2/71 15404
/proc/meminfo: memFree=1580960/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=35872 CPUtime=6.29
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 8610 0 0 0 625 4 0 0 25 0 1 0 1195493802 36732928 8595 1992294400 134512640 135243866 4294956256 18446744073709551615 134535475 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 8968 8595 80 178 0 8788 0
Current children cumulated CPU time (s) 6.29
Current children cumulated vsize (KiB) 35872

[startup+12.7024 s]
/proc/loadavg: 0.22 0.05 0.02 2/71 15404
/proc/meminfo: memFree=1570144/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=49048 CPUtime=12.68
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 12003 0 0 0 1263 5 0 0 25 0 1 0 1195493802 50225152 11988 1992294400 134512640 135243866 4294956256 18446744073709551615 134541950 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 12262 11988 80 178 0 12082 0
Current children cumulated CPU time (s) 12.68
Current children cumulated vsize (KiB) 49048

[startup+25.5017 s]
/proc/loadavg: 0.39 0.09 0.03 2/71 15404
/proc/meminfo: memFree=1565216/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=52464 CPUtime=25.49
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 12563 0 0 0 2543 6 0 0 25 0 1 0 1195493802 53723136 12548 1992294400 134512640 135243866 4294956256 18446744073709551615 134535587 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 13116 12548 80 178 0 12936 0
Current children cumulated CPU time (s) 25.49
Current children cumulated vsize (KiB) 52464

Solver just ended. Dumping a history of the last processes samples

[startup+31.9053 s]
/proc/loadavg: 0.44 0.11 0.03 2/71 15404
/proc/meminfo: memFree=1569632/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=46312 CPUtime=31.89
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 12572 0 0 0 3183 6 0 0 25 0 1 0 1195493802 47423488 11385 1992294400 134512640 135243866 4294956256 18446744073709551615 134555920 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 11578 11385 87 178 0 11398 0
Current children cumulated CPU time (s) 31.89
Current children cumulated vsize (KiB) 46312

[startup+33.5015 s]
/proc/loadavg: 0.44 0.11 0.03 2/71 15404
/proc/meminfo: memFree=1569632/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=46312 CPUtime=33.48
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 12572 0 0 0 3342 6 0 0 25 0 1 0 1195493802 47423488 11385 1992294400 134512640 135243866 4294956256 18446744073709551615 134555920 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 11578 11385 87 178 0 11398 0
Current children cumulated CPU time (s) 33.48
Current children cumulated vsize (KiB) 46312

[startup+34.3016 s]
/proc/loadavg: 0.49 0.12 0.04 2/71 15404
/proc/meminfo: memFree=1569632/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=46312 CPUtime=34.28
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 12572 0 0 0 3422 6 0 0 25 0 1 0 1195493802 47423488 11385 1992294400 134512640 135243866 4294956256 18446744073709551615 134555738 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 11578 11385 87 178 0 11398 0
Current children cumulated CPU time (s) 34.28
Current children cumulated vsize (KiB) 46312

[startup+35.1016 s]
/proc/loadavg: 0.49 0.12 0.04 2/71 15404
/proc/meminfo: memFree=1569632/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=46312 CPUtime=35.09
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 12573 0 0 0 3503 6 0 0 25 0 1 0 1195493802 47423488 11386 1992294400 134512640 135243866 4294956256 18446744073709551615 134555834 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 11578 11386 87 178 0 11398 0
Current children cumulated CPU time (s) 35.09
Current children cumulated vsize (KiB) 46312

[startup+35.3017 s]
/proc/loadavg: 0.49 0.12 0.04 2/71 15404
/proc/meminfo: memFree=1569632/2055920 swapFree=4173148/4192956
[pid=15403] ppid=15401 vsize=46312 CPUtime=35.28
/proc/15403/stat : 15403 (minisat_static) R 15401 15403 15366 0 -1 4194304 12573 0 0 0 3522 6 0 0 25 0 1 0 1195493802 47423488 11386 1992294400 134512640 135243866 4294956256 18446744073709551615 134558479 0 0 4096 3 0 0 0 17 1 0 0
/proc/15403/statm: 11578 11386 87 178 0 11398 0
Current children cumulated CPU time (s) 35.28
Current children cumulated vsize (KiB) 46312

Child status: 10
Real time (s): 35.3987
CPU time (s): 35.3866
CPU user time (s): 35.3146
CPU system time (s): 0.071989
CPU usage (%): 99.9658
Max. virtual memory (cumulated for all children) (KiB): 52464

getrusage(RUSAGE_CHILDREN,...) data:
user time used= 35.3146
system time used= 0.071989
maximum resident set size= 0
integral shared memory size= 0
integral unshared data size= 0
integral unshared stack size= 0
page reclaims= 12584
page faults= 0
swaps= 0
block input operations= 0
block output operations= 0
messages sent= 0
messages received= 0
signals received= 0
voluntary context switches= 2
involuntary context switches= 30

runsolver used 0.034994 second user time and 0.104984 second system time

The end

Launcher Data 

Begin job on node36 at 2009-04-09 00:05:05
IDJOB=1592850
IDBENCH=71067
IDSOLVER=568
FILE ID=node36/1592850-1239228305
PBS_JOBID= 9113616
Free space on /tmp= 66472 MiB

SOLVER NAME= minisat2-simp 070721
BENCH NAME= SAT09/APPLICATIONS/satComp09_BioInstances/ndhf_xits_22_SAT.cnf
COMMAND LINE= minisat_static BENCHNAME
RUNSOLVER COMMAND LINE= BIN/runsolver --timestamp -w /tmp/evaluation-result-1592850-1239228305/watcher-1592850-1239228305 -o /tmp/evaluation-result-1592850-1239228305/solver-1592850-1239228305 -C 1200 -W 1800 -M 1800 --output-limit 1,15  minisat_static HOME/instance-1592850-1239228305.cnf

TIME LIMIT= 1200 seconds
MEMORY LIMIT= 1800 MiB
MAX NB THREAD= 0

MD5SUM BENCH= 0370c302d744cf5297e07b7d8a6a8190
RANDOM SEED=272878066

node36.alineos.net Linux 2.6.9-22.EL.rootsmp #1 SMP Mon Oct 3 08:59:52 CEST 2005

/proc/cpuinfo:
processor	: 0
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.214
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5914.62
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:

processor	: 1
vendor_id	: GenuineIntel
cpu family	: 15
model		: 4
model name	:                   Intel(R) Xeon(TM) CPU 3.00GHz
stepping	: 3
cpu MHz		: 3000.214
cache size	: 2048 KB
fpu		: yes
fpu_exception	: yes
cpuid level	: 5
wp		: yes
flags		: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm syscall nx lm pni monitor ds_cpl cid cx16 xtpr
bogomips	: 5586.94
clflush size	: 64
cache_alignment	: 128
address sizes	: 36 bits physical, 48 bits virtual
power management:


/proc/meminfo:
MemTotal:      2055920 kB
MemFree:       1615944 kB
Buffers:         21816 kB
Cached:         344000 kB
SwapCached:       9068 kB
Active:          40176 kB
Inactive:       336060 kB
HighTotal:           0 kB
HighFree:            0 kB
LowTotal:      2055920 kB
LowFree:       1615944 kB
SwapTotal:     4192956 kB
SwapFree:      4173148 kB
Dirty:           10684 kB
Writeback:           0 kB
Mapped:          16052 kB
Slab:            49180 kB
Committed_AS:  3696680 kB
PageTables:       1876 kB
VmallocTotal: 536870911 kB
VmallocUsed:    264952 kB
VmallocChunk: 536605679 kB
HugePages_Total:     0
HugePages_Free:      0
Hugepagesize:     2048 kB

Free space on /tmp at the end= 66472 MiB
End job on node36 at 2009-04-09 00:05:41